Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-800086), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
268 Cha-F-200340 X 0.42
200 TH-M-000060 X 0.39
321 Cha-F-600151 X 0.37
865 TH-F-000025 X 0.33
829 VGlut-F-000436 X 0.32

Cluster composition

This cluster has 6 neurons. The exemplar of this cluster (Gad1-F-800086) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-800086 4090 GadMARCM-F000678_seg001 Gad1-Gal4 F 25602.99 1.00
fru-M-000032 1431 FruMARCM-M000942_seg001 fru-Gal4 M 7242.32 0.38
Cha-F-000326 4318 ChaMARCM-F001381_seg001 Cha-Gal4 F 16359.29 0.60
Cha-F-100079 7166 ChaMARCM-F000621_seg001 Cha-Gal4 F 8931.07 0.39
Cha-F-300145 7730 ChaMARCM-F000540_seg002 Cha-Gal4 F 16381.50 0.68
TH-F-500006 13699 THMARCM-721F_seg TH-Gal4 F 9682.76 0.26