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| si:frechter2018:start [2018/06/05 10:33] – created jefferis | si:frechter2018:start [2019/06/03 16:05] (current) – jefferis |
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| A full set of supplemental information will be made available when this manuscript is available for publication. | Supplementary data to accompany: |
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| In the meantime the libraries, electrophysiological and anatomical data for the analyses presented in the paper are available on GitHub as follows: | Functional and Anatomical Specificity in a Higher Olfactory Centre\\ |
| | Shahar Frechter, Alexander S. Bates, Sina Tootoonian, Michael-John Dolan, James D. Manton, Arian Jamasb, Johannes Kohl, Davi Bock, Gregory S.X.E. Jefferis\\ |
| | https://doi.org/10.1101/336982 |
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| * [[https://github.com/jefferislab/physplit.analysis|physplit.analysis]] source code for analysis functions | The easiest way to explore LHN cell types described in this manuscript is via the [[http://jefferislab.org/si/lhlibrary|LH library]] web application: |
| * [[https://github.com/jefferislab/physplit.analysis|physplitdata]] anatomical and odour response data for recorded neurons | |
| * [[https://github.com/jefferislab/lhns|lhns]] complete library of LH input, local and output neurons | [[http://jefferislab.org/si/lhlibrary|{{:si:frechter2018:lh_lib_screenshot.png?nolink&400}}]] |
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| | The R packages, electrophysiological and anatomical data for the analyses presented in the paper are available on GitHub as follows: |
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| | * [[https://github.com/jefferislab/physplit.analysis|physplit.analysis]] source code for analysis functions |
| | * [[https://github.com/jefferislab/physplit.analysis|physplitdata]] anatomical and odour response data for recorded neurons |
| | * [[https://github.com/jefferislab/lhns|lhns]] complete library of LH input, local and output neurons |
| | * [[https://github.com/jefferis/gphys|gphys]] R package to analyse electrophysiology data acquired by Neuromatic / Igor Pro |
| | * [[https://github.com/jefferislab/LHlibrary | LHlibrary]] Web application to share complete library of LH input, local and output neurons |
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| Note that the lhns package includes annotated skeleton data originally associated with Ann-Shyn Chiang's manuscript "Three-dimensional reconstruction of brain-wide wiring networks in Drosophila at single-cell resolution" (Current Biology 2011, 21(1), pp.1-11). Images from FlyCircuit were obtained from the NCHC (National Center for High-performance Computing) and NTHU (National Tsing Hua University), Hsinchu, Taiwan. We are grateful to Professor Chiang for his leadership in making these data freely available. | Note that the lhns package includes annotated skeleton data originally associated with Ann-Shyn Chiang's manuscript "Three-dimensional reconstruction of brain-wide wiring networks in Drosophila at single-cell resolution" (Current Biology 2011, 21(1), pp.1-11). Images from FlyCircuit were obtained from the NCHC (National Center for High-performance Computing) and NTHU (National Tsing Hua University), Hsinchu, Taiwan. We are grateful to Professor Chiang for his leadership in making these data freely available. |
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| | ====== Data Download ====== |
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| | In addition to the repositories above, we also provide a packaged version of our annotated library of LHN morphologies [[https://github.com/jefferislab/LHlibrary/releases/download/v2.2/LHlibrary_morphologies.zip]] |
