Cluster 889
Part of supercluster XIX
About
Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-F-300053), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.
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Credits
Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.
Image processing carried out with unu, CMTK, and Fiji.
Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.
Similar clusters
The most similar clusters to this one are:
| Cluster | Exemplar | Supercluster | Exemplar normalised score |
|---|---|---|---|
| 1003 | VGlut-F-000024 | XIX | 0.36 |
| 881 | Trh-F-200023 | XIX | 0.27 |
| 136 | TH-M-000013 | XVII | 0.25 |
| 941 | VGlut-F-200251 | XIX | 0.20 |
| 193 | TH-M-100039 | XIX | 0.19 |
Cluster composition
This cluster has 8 neurons. The exemplar of this cluster (Trh-F-300053) is drawn in black.
| Neuron | idid | Gene name | Driver | Sex | Raw score | Normalised score |
|---|---|---|---|---|---|---|
| Trh-F-300053 | 14080 | TPHMARCM-429F_seg1 | Trh-Gal4 | F | 27835.28 | 1.00 |
| Trh-M-400019 | 1980 | TPHMARCM-0449M_seg001 | Trh-Gal4 | M | 18554.34 | 0.66 |
| Trh-M-200025 | 3495 | TPHMARCM-365M_seg2 | Trh-Gal4 | M | 18509.27 | 0.62 |
| Gad1-F-000049 | 9545 | GadMARCM-F000425_seg001 | Gad1-Gal4 | F | 5330.55 | 0.31 |
| Gad1-F-600059 | 9641 | GadMARCM-F000495_seg001 | Gad1-Gal4 | F | 18110.80 | 0.63 |
| Trh-F-200117 | 12388 | TPHMARCM-1182F_seg2 | Trh-Gal4 | F | 16042.85 | 0.57 |
| Trh-F-300019 | 13963 | TPHMARCM-253F_seg1 | Trh-Gal4 | F | 16582.39 | 0.61 |
| Trh-F-300087 | 14183 | TPHMARCM-622F_seg1 | Trh-Gal4 | F | 12013.41 | 0.45 |