Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (TH-F-300062), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
129 fru-M-500019 XII 0.70
48 fru-M-500155 XII 0.69
31 fru-M-000206 XII 0.64
73 fru-M-100191 XII 0.64
1046 VGlut-F-000154 XII 0.63
666 TH-F-200011 IX 0.58
863 TH-F-000022 XII 0.56
215 fru-F-100075 XII 0.54
273 Cha-F-000338 XII 0.50

Cluster composition

This cluster has 16 neurons. The exemplar of this cluster (TH-F-300062) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
TH-F-300062 13558 THMARCM-460F_seg2 TH-Gal4 F 91740.25 1.00
fru-M-200076 1596 FruMARCM-M000690_seg001 fru-Gal4 M 55742.14 0.52
TH-M-200075 3273 THMARCM-467M_seg2 TH-Gal4 M 66429.50 0.74
TH-M-000010 3300 THMARCM-516M_seg1 TH-Gal4 M 69743.12 0.75
TH-M-000047 3345 THMARCM-642M_seg TH-Gal4 M 69925.26 0.76
Gad1-F-200154 4121 GadMARCM-F000707_seg001 Gad1-Gal4 F 45570.37 0.54
VGlut-F-000011 6076 DvGlutMARCM-F062-X3_seg3 VGlut-Gal4 F 25749.53 0.43
Cha-F-300006 11576 ChaMARCM-F000012_seg002 Cha-Gal4 F 52096.59 0.49
Trh-F-000033 13309 TPHMARCM-796F_seg1 Trh-Gal4 F 69322.92 0.77
TH-F-000000 13314 THMARCM-031F_seg1 TH-Gal4 F 69706.89 0.75
TH-F-200087 13554 THMARCM-454F_seg1 TH-Gal4 F 70632.02 0.77
TH-F-000061 13686 THMARCM-709F_seg TH-Gal4 F 67046.12 0.75
TH-F-000065 13698 THMARCM-720F_seg TH-Gal4 F 63855.89 0.72
VGlut-F-000289 14400 DvGlutMARCM-F1080_seg1 VGlut-Gal4 F 60143.93 0.53
VGlut-F-100156 15147 DvGlutMARCM-F1480_seg1 VGlut-Gal4 F 56813.86 0.67
VGlut-F-200324 15382 DvGlutMARCM-F1739_seg1 VGlut-Gal4 F 47561.27 0.47