Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000431), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
861 TH-F-000013 IX 0.59
687 VGlut-F-500173 IX 0.54
217 fru-F-100078 IX 0.49
791 VGlut-F-000482 IX 0.46
847 TH-F-000004 IX 0.42

Cluster composition

This cluster has 9 neurons. The exemplar of this cluster (VGlut-F-000431) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000431 12740 DVGlutMARCM-F2000_seg1 VGlut-Gal4 F 33780.46 1.00
Trh-M-000104 2290 TPHMARCM-M001773_seg001 Trh-Gal4 M 21834.60 0.68
Trh-M-100076 2633 TPHMARCM-M001373_seg001 Trh-Gal4 M 23730.58 0.70
Trh-M-200066 2637 TPHMARCM-M001385_seg001 Trh-Gal4 M 23854.78 0.67
Trh-M-100040 3558 TPHMARCM-489M_seg1 Trh-Gal4 M 23047.75 0.70
Trh-M-100043 3560 TPHMARCM-492M_seg1 Trh-Gal4 M 23941.77 0.72
Cha-F-200248 5155 ChaMARCM-F001201_seg001 Cha-Gal4 F 16402.08 0.60
VGlut-F-200080 10744 DvGlutMARCM-F234_seg1 VGlut-Gal4 F 21948.06 0.62
VGlut-F-100122 14861 DvGlutMARCM-F1207_seg1 VGlut-Gal4 F 11319.94 0.40