Cluster 550
Part of supercluster II
About
Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-300513), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.
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Credits
Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.
Image processing carried out with unu, CMTK, and Fiji.
Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.
Similar clusters
The most similar clusters to this one are:
| Cluster | Exemplar | Supercluster | Exemplar normalised score |
|---|---|---|---|
| 775 | VGlut-F-500422 | II | 0.62 |
| 509 | VGlut-F-200536 | VII | 0.60 |
| 363 | Cha-F-600141 | II | 0.52 |
| 19 | fru-M-300282 | II | 0.48 |
| 263 | Cha-F-000316 | II | 0.46 |
Cluster composition
This cluster has 5 neurons. The exemplar of this cluster (VGlut-F-300513) is drawn in black.
| Neuron | idid | Gene name | Driver | Sex | Raw score | Normalised score |
|---|---|---|---|---|---|---|
| VGlut-F-300513 | 8585 | DvGlutMARCM-F003651_seg002 | VGlut-Gal4 | F | 9008.88 | 1.00 |
| Cha-F-500190 | 3851 | ChaMARCM-F001522_seg002 | Cha-Gal4 | F | 6456.00 | 0.69 |
| VGlut-F-200564 | 6586 | DvGlutMARCM-F004346_seg002 | VGlut-Gal4 | F | 6322.25 | 0.64 |
| VGlut-F-700163 | 10890 | DvGlutMARCM-F002796_seg001 | VGlut-Gal4 | F | 6336.55 | 0.64 |
| VGlut-F-600367 | 11188 | DvGlutMARCM-F002675_seg001 | VGlut-Gal4 | F | 3724.95 | 0.53 |