• Registration software
  • Fully open source cross-platform CMTK software by Torsten Rohlfing and collaborators.
  • Simple GUI wrapper for CMTK (MacOS X only).
• Source code for Neuroanatomy Analysis Suite for R. Available from:
  • http://flybrain.stanford.edu/R
  • as a git repository
• Our ImageJ plugins are now bundled with Fiji
  • Biorad PIC (w)
  • NRRD (r/w)
  • Standalone versions of these plugins are also available
    • NRRD
    • Biorad
• Amira plugins for input/ouput of NRRD format files:
  • source code repository on github