Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500219), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
177 Trh-M-300109 VIII 0.63
803 Trh-F-700063 VIII 0.54
473 fru-F-800038 VIII 0.53
801 Trh-F-600102 VIII 0.41
804 Trh-F-500188 VIII 0.38

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (VGlut-F-500219) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500219 15312 DvGlutMARCM-F1651_seg1 VGlut-Gal4 F 11218.39 1.00
Trh-M-400114 2076 TPHMARCM-M001578_seg001 Trh-Gal4 M 7361.61 0.67
Trh-M-500193 2113 TPHMARCM-M001611_seg001 Trh-Gal4 M 7823.03 0.69
Trh-M-600102 2205 TPHMARCM-M001694_seg001 Trh-Gal4 M 7033.38 0.63
Trh-M-400056 2815 TPHMARCM-1044M_seg1 Trh-Gal4 M 7203.51 0.65
Trh-M-500080 2819 TPHMARCM-1048M_seg1 Trh-Gal4 M 7103.16 0.67
Trh-M-300096 2852 TPHMARCM-1080M_seg1 Trh-Gal4 M 6845.67 0.50
Trh-M-300107 2868 TPHMARCM-1106M_seg1 Trh-Gal4 M 7350.98 0.67
Trh-M-400029 3633 TPHMARCM-606M_seg1 Trh-Gal4 M 8195.56 0.71
Gad1-F-800079 4047 GadMARCM-F000648_seg001 Gad1-Gal4 F 7936.96 0.70
Trh-F-400076 13250 TPHMARCM-737F_seg1 Trh-Gal4 F 7982.35 0.72
Trh-F-400059 14177 TPHMARCM-614F_seg1 Trh-Gal4 F 7849.45 0.69
VGlut-F-400387 15166 DvGlutMARCM-F1498_seg1 VGlut-Gal4 F 7587.94 0.69