Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-100136), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
96 fru-M-800049 XVI 0.62
41 fru-M-700086 XVI 0.62
111 fru-M-100078 XVI 0.59
412 fru-F-200098 XVI 0.58
979 VGlut-F-400141 XVI 0.58
101 fru-M-500143 XVI 0.56
419 fru-F-200021 XVI 0.51

Cluster composition

This cluster has 30 neurons. The exemplar of this cluster (VGlut-F-100136) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-100136 14966 DvGlutMARCM-F1304_seg1 VGlut-Gal4 F 9589.73 1.00
fru-M-400229 398 FruMARCM-M002629_seg002 fru-Gal4 M 5773.90 0.65
fru-M-100034 1873 FruMARCM-M000416_seg001 fru-Gal4 M 6222.85 0.67
fru-M-500021 1913 FruMARCM-M000468_seg002 fru-Gal4 M 4631.08 0.56
Gad1-F-800075 4015 GadMARCM-F000627_seg002 Gad1-Gal4 F 5703.56 0.62
fru-F-300098 4547 FruMARCM-F001657_seg001 fru-Gal4 F 6164.94 0.67
Cha-F-700171 5150 ChaMARCM-F001198_seg002 Cha-Gal4 F 5491.62 0.62
Cha-F-500146 5335 ChaMARCM-F000710_seg001 Cha-Gal4 F 4497.32 0.52
Cha-F-300266 5693 ChaMARCM-F000952_seg001 Cha-Gal4 F 5483.85 0.61
Cha-F-700004 6146 ChaMARCM-F000028_seg003 Cha-Gal4 F 6112.95 0.67
fru-F-200099 6342 FruMARCM-F001494_seg003 fru-Gal4 F 6280.54 0.65
fru-F-200102 6348 FruMARCM-F001498_seg002 fru-Gal4 F 6239.45 0.65
VGlut-F-600680 8006 DvGlutMARCM-F003825_seg001 VGlut-Gal4 F 6044.79 0.66
Cha-F-000024 8063 ChaMARCM-F000134_seg001 Cha-Gal4 F 5672.00 0.63
Cha-F-400057 8371 ChaMARCM-F000313_seg001 Cha-Gal4 F 5554.97 0.61
Gad1-F-700025 8404 GadMARCM-F000264_seg001 Gad1-Gal4 F 5288.14 0.58
VGlut-F-500714 8805 DvGlutMARCM-F003615_seg002 VGlut-Gal4 F 5234.19 0.56
VGlut-F-100316 8859 DvGlutMARCM-F003648_seg001 VGlut-Gal4 F 6138.26 0.67
Gad1-F-500073 9464 GadMARCM-F000365_seg001 Gad1-Gal4 F 5903.76 0.59
Gad1-F-800060 9696 GadMARCM-F000543_seg001 Gad1-Gal4 F 5063.55 0.58
fru-F-600010 9789 FruMARCM-F000308_seg001 fru-Gal4 F 5669.02 0.61
fru-F-500013 9842 FruMARCM-F000409_seg001 fru-Gal4 F 5398.48 0.55
fru-F-600023 9942 FruMARCM-F000527_seg001 fru-Gal4 F 6102.90 0.65
Cha-F-500033 10180 ChaMARCM-F000109_seg001 Cha-Gal4 F 5507.29 0.60
Gad1-F-200026 10732 GadMARCM-F000057_seg002 Gad1-Gal4 F 5780.51 0.62
VGlut-F-900058 11063 DvGlutMARCM-F002940_seg001 VGlut-Gal4 F 6375.49 0.67
Gad1-F-300089 11387 GadMARCM-F000340_seg001 Gad1-Gal4 F 5502.57 0.59
VGlut-F-500467 12235 DvGlutMARCM-F002698_seg001 VGlut-Gal4 F 5733.87 0.59
Gad1-F-300014 12629 GadMARCM-F000033_seg001 Gad1-Gal4 F 5152.10 0.54
Gad1-F-200000 13164 GadMARCM-F001_seg1 Gad1-Gal4 F 5616.85 0.56