Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500115), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
660 Tdc2-F-200049 I 0.57
133 fru-M-700043 I 0.47
947 VGlut-F-200272 I 0.44
809 VGlut-F-800040 III 0.33
604 VGlut-F-200456 III 0.33

Cluster composition

This cluster has 8 neurons. The exemplar of this cluster (VGlut-F-500115) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500115 14600 DvGlutMARCM-F862_seg1 VGlut-Gal4 F 11355.06 1.00
fru-M-300241 859 FruMARCM-M002116_seg002 fru-Gal4 M 3307.08 0.44
Gad1-F-400045 6159 GadMARCM-F000333_seg004 Gad1-Gal4 F 2876.80 0.45
VGlut-F-400860 6921 DvGlutMARCM-F004075_seg001 VGlut-Gal4 F 7375.27 0.65
VGlut-F-600637 8911 DvGlutMARCM-F003484_seg002 VGlut-Gal4 F 4968.29 0.45
VGlut-F-300489 9373 DvGlutMARCM-F003203_seg001 VGlut-Gal4 F 6740.12 0.57
VGlut-F-600130 13117 DvGlutMARCM-F2143_seg1 VGlut-Gal4 F 6731.60 0.55
VGlut-F-300021 15799 DvGlutMARCM-F210_seg1 VGlut-Gal4 F 5035.07 0.41