Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-300147), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
692 VGlut-F-700130 II 0.48
133 fru-M-700043 I 0.47
899 VGlut-F-100044 V 0.46
660 Tdc2-F-200049 I 0.44
712 VGlut-F-900055 V 0.43

Cluster composition

This cluster has 15 neurons. The exemplar of this cluster (VGlut-F-300147) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-300147 14439 DvGlutMARCM-F730_seg1 VGlut-Gal4 F 8325.53 1.00
Gad1-F-400114 3934 GadMARCM-F000574_seg002 Gad1-Gal4 F 1923.76 0.41
Cha-F-900000 8087 ChaMARCM-F000151_seg001 Cha-Gal4 F 3854.20 0.56
VGlut-F-800222 8607 DvGlutMARCM-F003669_seg001 VGlut-Gal4 F 3276.16 0.46
VGlut-F-600613 9142 DvGlutMARCM-F003433_seg001 VGlut-Gal4 F 3903.38 0.57
VGlut-F-100281 9225 DvGlutMARCM-F003289_seg001 VGlut-Gal4 F 3716.51 0.47
VGlut-F-500590 9355 DvGlutMARCM-F003188_seg001 VGlut-Gal4 F 5391.39 0.67
VGlut-F-500287 10818 DvGlutMARCM-F1860_seg1 VGlut-Gal4 F 4180.10 0.48
Gad1-F-300080 11372 GadMARCM-F000327_seg003 Gad1-Gal4 F 1336.66 0.41
VGlut-F-600329 12158 DvGlutMARCM-F002646_seg003 VGlut-Gal4 F 3304.02 0.47
VGlut-F-600341 12170 DvGlutMARCM-F002653_seg003 VGlut-Gal4 F 3193.01 0.47
VGlut-F-400602 12307 DvGlutMARCM-F002770_seg001 VGlut-Gal4 F 4274.20 0.57
VGlut-F-200065 12367 DvGlutMARCM-F117-X2_seg2 VGlut-Gal4 F 4699.36 0.58
VGlut-F-000301 14743 DvGlutMARCM-F1095_seg1 VGlut-Gal4 F 3785.28 0.48
VGlut-F-300074 16114 DvGlutMARCM-F498-X3_seg1 VGlut-Gal4 F 4252.00 0.47