Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-F-700028), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
180 Trh-M-900013 X 0.70
321 Cha-F-600151 X 0.66
641 fru-F-600033 X 0.61
145 Trh-M-200079 VII 0.58
171 Trh-M-000046 X 0.57
939 VGlut-F-400341 X 0.52

Cluster composition

This cluster has 23 neurons. The exemplar of this cluster (Trh-F-700028) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-F-700028 13306 TPHMARCM-788F_seg1 Trh-Gal4 F 9475.84 1.00
Trh-M-400076 922 TPHMARCM-1072M_seg001 Trh-Gal4 M 6423.13 0.65
fru-M-500079 1393 FruMARCM-M000895_seg001 fru-Gal4 M 6125.69 0.66
fru-M-400073 1424 FruMARCM-M000937_seg001 fru-Gal4 M 6269.05 0.61
Trh-M-600035 1986 TPHMARCM-0770M_seg001 Trh-Gal4 M 6338.41 0.66
Trh-M-500099 2678 TPHMARCM-M001444_seg001 Trh-Gal4 M 6170.95 0.59
Trh-M-800011 2958 TPHMARCM-899M_seg1 Trh-Gal4 M 6334.94 0.65
Trh-M-800019 2991 TPHMARCM-934M_seg1 Trh-Gal4 M 5940.76 0.65
Trh-M-600055 3032 TPHMARCM-985M_seg1 Trh-Gal4 M 6564.03 0.65
fru-F-500198 4529 FruMARCM-F001640_seg001 fru-Gal4 F 6712.01 0.69
fru-F-100067 4769 FruMARCM-F002088_seg001 fru-Gal4 F 6688.05 0.68
Cha-F-000216 5021 ChaMARCM-F001109_seg003 Cha-Gal4 F 5497.91 0.45
fru-F-400130 6186 FruMARCM-F001118_seg001 fru-Gal4 F 6367.63 0.65
fru-F-700128 6256 FruMARCM-F001286_seg001 fru-Gal4 F 6780.79 0.68
VGlut-F-900122 6461 DvGlutMARCM-F004246_seg001 VGlut-Gal4 F 6458.94 0.66
Cha-F-500060 8177 ChaMARCM-F000194_seg002 Cha-Gal4 F 5348.67 0.49
fru-F-600011 9918 FruMARCM-F000501_seg001 fru-Gal4 F 6857.05 0.70
Trh-F-500134 12469 TPHMARCM-1258F_seg1 Trh-Gal4 F 6600.69 0.67
Trh-F-500180 12538 TPHMARCM-1321F_seg1 Trh-Gal4 F 6117.35 0.64
Trh-F-600038 13263 TPHMARCM-751F_seg1 Trh-Gal4 F 6539.17 0.64
Trh-F-900019 13275 TPHMARCM-761F_seg1 Trh-Gal4 F 5850.75 0.54
Trh-F-700029 13307 TPHMARCM-789F_seg1 Trh-Gal4 F 6098.30 0.65
Trh-F-400013 13868 TPHMARCM-138F_seg1 Trh-Gal4 F 6687.29 0.68