Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000425), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.65
647 Trh-F-000067 II 0.52
507 VGlut-F-300536 II 0.50
428 VGlut-F-500822 II 0.49
660 Tdc2-F-200049 I 0.47

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (VGlut-F-000425) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000425 12896 DvGlutMARCM-F1939_seg1 VGlut-Gal4 F 12960.94 1.00
fru-M-700115 708 FruMARCM-M001911_seg001 fru-Gal4 M 6173.20 0.43
Cha-F-000290 4175 ChaMARCM-F001282_seg001 Cha-Gal4 F 5964.32 0.52
Cha-F-800053 5093 ChaMARCM-F001155_seg001 Cha-Gal4 F 6727.82 0.52
Cha-F-000004 6140 ChaMARCM-F000008_seg001 Cha-Gal4 F 6735.26 0.48
Cha-F-100071 7143 ChaMARCM-F000608_seg001 Cha-Gal4 F 8187.95 0.62
Cha-F-400088 7248 ChaMARCM-F000420_seg001 Cha-Gal4 F 8567.33 0.67
Cha-F-200089 7641 ChaMARCM-F000474_seg001 Cha-Gal4 F 7697.96 0.56
VGlut-F-500643 9286 DvGlutMARCM-F003335_seg002 VGlut-Gal4 F 7640.26 0.58
Gad1-F-200027 10533 GadMARCM-F000066_seg001 Gad1-Gal4 F 6182.67 0.52
Gad1-F-000027 11294 GadMARCM-F000267_seg001 Gad1-Gal4 F 8581.66 0.64
Gad1-F-200091 11337 GadMARCM-F000304_seg001 Gad1-Gal4 F 7765.80 0.54
VGlut-F-300109 15482 DvGlutMARCM-F641_seg1 VGlut-Gal4 F 8703.64 0.69