Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500300), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
911 VGlut-F-400172 XI 0.56
662 Tdc2-F-400026 XIII 0.53
842 Trh-F-400067 XI 0.52
375 VGlut-F-500848 XI 0.45
799 Trh-F-500124 XI 0.36

Cluster composition

This cluster has 9 neurons. The exemplar of this cluster (VGlut-F-500300) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500300 12847 DvGlutMARCM-F1891_seg1 VGlut-Gal4 F 10159.19 1.00
VGlut-F-800290 5726 DvGlutMARCM-F004433_seg001 VGlut-Gal4 F 6748.94 0.70
VGlut-F-500809 6549 DvGlutMARCM-F004311_seg001 VGlut-Gal4 F 6847.35 0.66
VGlut-F-700269 8502 DvGlutMARCM-F003086_seg001 VGlut-Gal4 F 5754.28 0.54
VGlut-F-500721 8596 DvGlutMARCM-F003660_seg001 VGlut-Gal4 F 6611.77 0.68
VGlut-F-000575 8676 DvGlutMARCM-F003719_seg001 VGlut-Gal4 F 6912.65 0.69
VGlut-F-600556 9421 DvGlutMARCM-F003237_seg001 VGlut-Gal4 F 6967.99 0.63
VGlut-F-400086 16002 DvGlutMARCM-F391_seg1 VGlut-Gal4 F 5664.45 0.46
VGlut-F-500092 16064 DvGlutMARCM-F450_seg1 VGlut-Gal4 F 6587.92 0.65