Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-600273), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
775 VGlut-F-500422 II 0.80
19 fru-M-300282 II 0.72
647 Trh-F-000067 II 0.66
509 VGlut-F-200536 VII 0.61
678 Gad1-F-200035 II 0.59
1022 VGlut-F-400066 II 0.58
550 VGlut-F-300513 II 0.56
511 Cha-F-000025 II 0.51

Cluster composition

This cluster has 5 neurons. The exemplar of this cluster (VGlut-F-600273) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-600273 11986 DvGlutMARCM-F002515_seg002 VGlut-Gal4 F 4396.24 1.00
Gad1-F-600098 3996 GadMARCM-F000614_seg001 Gad1-Gal4 F 2689.99 0.56
Cha-F-200350 4342 ChaMARCM-F001400_seg001 Cha-Gal4 F 3280.57 0.59
VGlut-F-100322 8603 DvGlutMARCM-F003665_seg002 VGlut-Gal4 F 2523.09 0.52
VGlut-F-700235 11131 DvGlutMARCM-F002994_seg002 VGlut-Gal4 F 2650.65 0.53