Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500408), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
539 VGlut-F-600186 XIII 0.47
941 VGlut-F-200251 XIX 0.38
199 TH-M-000044 XIX 0.34
925 VGlut-F-400268 XIII 0.32
862 TH-F-200095 XIX 0.27

Cluster composition

This cluster has 4 neurons. The exemplar of this cluster (VGlut-F-500408) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500408 11974 DvGlutMARCM-F002508_seg001 VGlut-Gal4 F 33461.56 1.00
Gad1-F-100069 3983 GadMARCM-F000605_seg001 Gad1-Gal4 F 18559.67 0.55
Cha-F-300216 5224 ChaMARCM-F000791_seg001 Cha-Gal4 F 16610.18 0.55
VGlut-F-300548 8011 DvGlutMARCM-F003829_seg001 VGlut-Gal4 F 18421.30 0.62