Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-600234), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
127 fru-M-700026 V 0.68
935 VGlut-F-100111 V 0.64
598 VGlut-F-100285 V 0.57
712 VGlut-F-900055 V 0.51
776 VGlut-F-500423 IV 0.48

Cluster composition

This cluster has 8 neurons. The exemplar of this cluster (VGlut-F-600234) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-600234 11836 DvGlutMARCM-F002394_seg001 VGlut-Gal4 F 8519.14 1.00
Gad1-F-000073 4069 GadMARCM-F000662_seg002 Gad1-Gal4 F 5126.79 0.50
Cha-F-200279 4163 ChaMARCM-F001274_seg001 Cha-Gal4 F 4732.12 0.38
VGlut-F-000505 6062 DvGlutMARCM-F003352_seg001 VGlut-Gal4 F 5768.01 0.68
VGlut-F-600708 6777 DvGlutMARCM-F003975_seg001 VGlut-Gal4 F 4258.82 0.62
VGlut-F-000257 14313 DvGlutMARCM-F1001_seg3 VGlut-Gal4 F 4605.60 0.48
VGlut-F-400212 14508 DvGlutMARCM-F781-x2_seg2 VGlut-Gal4 F 5421.32 0.63
VGlut-F-400345 14926 DvGlutMARCM-F1266_seg3 VGlut-Gal4 F 4011.09 0.39