Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-000020), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.23
509 VGlut-F-200536 VII 0.12
406 fru-F-000053 VII 0.03
775 VGlut-F-500422 II 0.03
660 Tdc2-F-200049 I -0.05

Cluster composition

This cluster has 5 neurons. The exemplar of this cluster (Gad1-F-000020) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-000020 11228 GadMARCM-F000210_seg001 Gad1-Gal4 F 19578.09 1.00
Cha-F-400228 4843 ChaMARCM-F000967_seg001 Cha-Gal4 F 9506.24 0.44
Cha-F-400231 5230 ChaMARCM-F000968_seg001 Cha-Gal4 F 8739.36 0.50
Cha-F-700121 7635 ChaMARCM-F000471_seg001 Cha-Gal4 F 3247.47 0.28
fru-F-700008 11452 FruMARCM-F000069_seg001 fru-Gal4 F 5036.89 0.43