Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500173), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
863 TH-F-000022 XII 0.44
847 TH-F-000004 IX 0.41
283 Cha-F-100343 IX 0.35
652 Tdc2-F-200010 VIII 0.33
176 Trh-M-300108 IX 0.33

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (VGlut-F-500173) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500173 10801 DvGlutMARCM-F1502_seg1 VGlut-Gal4 F 120076.65 1.00
fru-M-300068 1926 FruMARCM-M000520_seg002 fru-Gal4 M 43476.98 0.51
Trh-M-800005 2923 TPHMARCM-859M_seg1 Trh-Gal4 M 31013.92 0.35
Trh-M-600000 3537 TPHMARCM-443M_seg1 Trh-Gal4 M 20460.06 0.27
Cha-F-000049 8327 ChaMARCM-F000284_seg004 Cha-Gal4 F 37593.21 0.51
TH-F-000041 13646 THMARCM-650F-X2_seg1 TH-Gal4 F 46589.70 0.30
VGlut-F-000372 15193 DvGlutMARCM-F1521_seg1 VGlut-Gal4 F 42453.29 0.51