Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-500002), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
652 Tdc2-F-200010 VIII 0.48
146 Trh-M-200088 VIII 0.48
177 Trh-M-300109 VIII 0.12
847 TH-F-000004 IX 0.10
960 VGlut-F-500219 VIII 0.03

Cluster composition

This cluster has 34 neurons. The exemplar of this cluster (Gad1-F-500002) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-500002 10713 GadMARCM-F000043_seg003 Gad1-Gal4 F 19452.80 1.00
Gad1-F-200124 3970 GadMARCM-F000595_seg002 Gad1-Gal4 F 14479.23 0.74
Gad1-F-200126 3972 GadMARCM-F000596_seg002 Gad1-Gal4 F 15231.00 0.76
Cha-F-400204 5634 ChaMARCM-F000912_seg002 Cha-Gal4 F 14550.15 0.75
Gad1-F-500041 6008 GadMARCM-F000171_seg002 Gad1-Gal4 F 15124.57 0.75
Gad1-F-200053 6011 GadMARCM-F000194_seg003 Gad1-Gal4 F 15532.27 0.77
VGlut-F-300612 6440 DvGlutMARCM-F004227_seg003 VGlut-Gal4 F 12560.57 0.69
Cha-F-700097 7230 ChaMARCM-F000404_seg003 Cha-Gal4 F 15171.56 0.75
Cha-F-700127 7655 ChaMARCM-F000486_seg001 Cha-Gal4 F 14514.23 0.75
VGlut-F-600608 9136 DvGlutMARCM-F003428_seg002 VGlut-Gal4 F 8760.72 0.53
VGlut-F-600582 9260 DvGlutMARCM-F003318_seg002 VGlut-Gal4 F 14652.72 0.75
Gad1-F-000039 9512 GadMARCM-F000401_seg004 Gad1-Gal4 F 14821.20 0.77
Gad1-F-800062 9698 GadMARCM-F000543_seg003 Gad1-Gal4 F 14466.77 0.76
Gad1-F-500024 10508 GadMARCM-F000155_seg003 Gad1-Gal4 F 12699.11 0.70
Gad1-F-800014 10689 GadMARCM-F000189_seg002 Gad1-Gal4 F 14467.39 0.74
VGlut-F-900063 11090 DvGlutMARCM-F002963_seg001 VGlut-Gal4 F 14383.01 0.75
Gad1-F-100027 11273 GadMARCM-F000248_seg002 Gad1-Gal4 F 15400.48 0.77
Gad1-F-200084 11330 GadMARCM-F000299_seg003 Gad1-Gal4 F 15215.58 0.77
Gad1-F-300088 11386 GadMARCM-F000339_seg002 Gad1-Gal4 F 14945.12 0.75
VGlut-F-200368 13008 DvGlutMARCM-F2036_seg1 VGlut-Gal4 F 14265.83 0.73
VGlut-F-600127 13107 DvGlutMARCM-F2132_seg1 VGlut-Gal4 F 10379.31 0.67
VGlut-F-200303 15323 DvGlutMARCM-F1663_seg1 VGlut-Gal4 F 13776.03 0.72
VGlut-F-300320 15344 DvGlutMARCM-F1691_seg1 VGlut-Gal4 F 14008.07 0.74
VGlut-F-500231 15347 DvGlutMARCM-F1696_seg1 VGlut-Gal4 F 13859.53 0.70
VGlut-F-300097 15442 DvGlutMARCM-F601_seg1 VGlut-Gal4 F 14018.87 0.75
VGlut-F-400031 15725 DvGlutMARCM-F137_seg1 VGlut-Gal4 F 14473.10 0.73
VGlut-F-800005 15747 DvGlutMARCM-F156_seg1 VGlut-Gal4 F 10516.30 0.58
VGlut-F-300020 15798 DvGlutMARCM-F209_seg1 VGlut-Gal4 F 14859.61 0.75
VGlut-F-300060 15937 DvGlutMARCM-F332_seg1 VGlut-Gal4 F 13517.70 0.65
VGlut-F-000054 15972 DvGlutMARCM-F363_seg1 VGlut-Gal4 F 14756.64 0.71
VGlut-F-000068 15996 DvGlutMARCM-F384_seg1 VGlut-Gal4 F 14688.75 0.75
VGlut-F-500087 16058 DvGlutMARCM-F445_seg1 VGlut-Gal4 F 14884.16 0.77
VGlut-F-300078 16123 DvGlutMARCM-F507_seg1 VGlut-Gal4 F 9690.84 0.55
VGlut-F-000136 16153 DvGlutMARCM-F536_seg1 VGlut-Gal4 F 12258.58 0.67