Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-600025), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1028 VGlut-F-000067 XIV 0.38
964 VGlut-F-200325 XIV 0.34
335 Cha-F-200213 XIV 0.33
619 Gad1-F-700038 XIV 0.32
354 Cha-F-100235 XIV 0.30

Cluster composition

This cluster has 3 neurons. The exemplar of this cluster (Gad1-F-600025) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-600025 10521 GadMARCM-F000162_seg002 Gad1-Gal4 F 7084.10 1.00
Cha-F-200160 5502 ChaMARCM-F000821_seg001 Cha-Gal4 F 4917.01 0.72
Cha-F-700141 7127 ChaMARCM-F000596_seg001 Cha-Gal4 F 3029.88 0.45