Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (fru-F-500100), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
658 Tdc2-F-300026 XIV 0.65
1028 VGlut-F-000067 XIV 0.59
964 VGlut-F-200325 XIV 0.57
231 Cha-F-300338 XIV 0.56
416 fru-F-600085 XIV 0.52
354 Cha-F-100235 XIV 0.51
204 Trh-M-100025 XIV 0.51

Cluster composition

This cluster has 17 neurons. The exemplar of this cluster (fru-F-500100) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
fru-F-500100 10039 FruMARCM-F000625_seg002 fru-Gal4 F 6844.93 1.00
fru-M-700149 78 FruMARCM-M002277_seg001 fru-Gal4 M 5242.70 0.72
fru-M-500150 446 FruMARCM-M001557_seg002 fru-Gal4 M 5295.01 0.72
fru-M-700011 950 FruMARCM-M000151_seg001 fru-Gal4 M 5110.65 0.70
fru-M-500119 1035 FruMARCM-M001215_seg001 fru-Gal4 M 5158.71 0.72
Gad1-F-000085 4092 GadMARCM-F000681_seg001 Gad1-Gal4 F 3417.20 0.42
Gad1-F-000092 4104 GadMARCM-F000692_seg001 Gad1-Gal4 F 4919.97 0.63
fru-F-500228 4704 FruMARCM-F001994_seg001 fru-Gal4 F 5267.05 0.72
fru-F-500178 6316 FruMARCM-F001441_seg001 fru-Gal4 F 5108.11 0.71
Cha-F-200118 7109 ChaMARCM-F000583_seg001 Cha-Gal4 F 4844.39 0.69
fru-F-700065 7272 FruMARCM-F000908_seg003 fru-Gal4 F 5230.70 0.72
fru-F-500113 7771 FruMARCM-F000669_seg001 fru-Gal4 F 5082.43 0.69
npf-F-400006 9460 npfMARCM-F000047_seg001 npf-GAL4 F 4154.23 0.54
Gad1-F-100044 9603 GadMARCM-F000470_seg001 Gad1-Gal4 F 4928.96 0.62
fru-F-500031 9912 FruMARCM-F000497_seg001 fru-Gal4 F 5290.54 0.74
Gad1-F-000031 11411 GadMARCM-F000355_seg001 Gad1-Gal4 F 4269.80 0.40
Gad1-F-200007 12619 GadMARCM-F000023_seg001 Gad1-Gal4 F 4777.40 0.60