Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-600057), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
241 Gad1-F-600093 II 0.58
486 VGlut-F-300556 II 0.53
817 VGlut-F-000425 II 0.51
673 Gad1-F-300033 II 0.45
428 VGlut-F-500822 II 0.43

Cluster composition

This cluster has 11 neurons. The exemplar of this cluster (Gad1-F-600057) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-600057 9478 GadMARCM-F000373_seg003 Gad1-Gal4 F 4658.19 1.00
Cha-F-000281 4154 ChaMARCM-F001268_seg001 Cha-Gal4 F 3024.25 0.66
Cha-F-100215 5049 ChaMARCM-F001129_seg002 Cha-Gal4 F 2463.81 0.50
Cha-F-300254 5668 ChaMARCM-F000935_seg002 Cha-Gal4 F 2810.03 0.59
Cha-F-500120 7076 ChaMARCM-F000561_seg001 Cha-Gal4 F 2733.09 0.60
Cha-F-700119 7633 ChaMARCM-F000470_seg001 Cha-Gal4 F 2812.68 0.62
Cha-F-700046 8131 ChaMARCM-F000173_seg004 Cha-Gal4 F 3256.24 0.68
Cha-F-700080 8252 ChaMARCM-F000241_seg001 Cha-Gal4 F 2829.41 0.60
VGlut-F-500641 9284 DvGlutMARCM-F003334_seg002 VGlut-Gal4 F 2641.39 0.59
Gad1-F-000025 11292 GadMARCM-F000266_seg001 Gad1-Gal4 F 2452.72 0.56
VGlut-F-700045 13071 DvGlutMARCM-F2094_seg1 VGlut-Gal4 F 2692.47 0.62