Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Gad1-F-400063), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
469 Cha-F-600044 XIV 0.51
667 TH-F-300071 XIV 0.51
1028 VGlut-F-000067 XIV 0.50
769 VGlut-F-500410 XIV 0.40
139 npf-M-900000 XIV 0.31

Cluster composition

This cluster has 10 neurons. The exemplar of this cluster (Gad1-F-400063) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Gad1-F-400063 9470 GadMARCM-F000370_seg001 Gad1-Gal4 F 2949.81 1.00
Gad1-F-900061 4043 GadMARCM-F000644_seg002 Gad1-Gal4 F 2365.28 0.78
Cha-F-100206 5011 ChaMARCM-F001102_seg001 Cha-Gal4 F 2057.00 0.64
Cha-F-700173 5152 ChaMARCM-F001199_seg001 Cha-Gal4 F 2137.39 0.68
Cha-F-300164 7144 ChaMARCM-F000609_seg001 Cha-Gal4 F 1798.33 0.50
Gad1-F-600062 9644 GadMARCM-F000497_seg001 Gad1-Gal4 F 954.84 0.42
Gad1-F-600003 10577 GadMARCM-F000097_seg002 Gad1-Gal4 F 2261.18 0.64
Gad1-F-600006 10580 GadMARCM-F000099_seg001 Gad1-Gal4 F 2239.70 0.71
Gad1-F-300046 10695 GadMARCM-F000195_seg002 Gad1-Gal4 F 2135.92 0.63
Gad1-F-300012 12627 GadMARCM-F000032_seg001 Gad1-Gal4 F 2173.08 0.73