Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-400678), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
662 Tdc2-F-400026 XIII 0.67
458 VGlut-F-700500 XI 0.51
1051 VGlut-F-200115 XI 0.38
423 VGlut-F-800259 XI 0.37
439 VGlut-F-700465 XI 0.36

Cluster composition

This cluster has 17 neurons. The exemplar of this cluster (VGlut-F-400678) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-400678 9413 DvGlutMARCM-F003229_seg001 VGlut-Gal4 F 8029.41 1.00
fru-M-100139 958 FruMARCM-M001454_seg002 fru-Gal4 M 5725.71 0.69
fru-F-000120 3742 FruMARCM-F002335_seg001 fru-Gal4 F 3620.09 0.44
Cha-F-300238 5527 ChaMARCM-F000835_seg001 Cha-Gal4 F 3023.75 0.38
VGlut-F-300622 6491 DvGlutMARCM-F004269_seg001 VGlut-Gal4 F 5747.02 0.72
VGlut-F-300629 6534 DvGlutMARCM-F004303_seg001 VGlut-Gal4 F 5671.40 0.69
VGlut-F-300635 6553 DvGlutMARCM-F004315_seg001 VGlut-Gal4 F 5923.34 0.71
VGlut-F-700460 6763 DvGlutMARCM-F003966_seg001 VGlut-Gal4 F 5773.23 0.71
VGlut-F-600767 7011 DvGlutMARCM-F004152_seg001 VGlut-Gal4 F 5618.11 0.70
VGlut-F-600772 7057 DvGlutMARCM-F004185_seg001 VGlut-Gal4 F 6100.11 0.70
fru-F-700058 7785 FruMARCM-F000680_seg001 fru-Gal4 F 5646.63 0.72
Cha-F-300104 8356 ChaMARCM-F000303_seg001 Cha-Gal4 F 5626.48 0.71
fru-F-400051 9768 FruMARCM-F000277_seg002 fru-Gal4 F 5779.17 0.69
VGlut-F-700132 10857 DvGlutMARCM-F002780_seg001 VGlut-Gal4 F 5657.92 0.68
VGlut-F-600492 11173 DvGlutMARCM-F003021_seg001 VGlut-Gal4 F 6014.51 0.75
VGlut-F-400514 11797 DvGlutMARCM-F002362_seg001 VGlut-Gal4 F 3780.25 0.45
Gad1-F-100006 13182 GadMARCM-F016_seg1 Gad1-Gal4 F 3873.65 0.43