Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-800152), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
661 Tdc2-F-000027 VII 0.74
173 Trh-M-000051 III 0.68
1006 VGlut-F-500043 III 0.67
759 VGlut-F-600257 III 0.60
1020 VGlut-F-100029 III 0.59
952 VGlut-F-600052 III 0.59
76 fru-M-300240 III 0.56
175 Trh-M-700055 III 0.55
874 Trh-F-100011 III 0.52
468 VGlut-F-600670 III 0.52

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (VGlut-F-800152) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-800152 9029 DvGlutMARCM-F003354_seg001 VGlut-Gal4 F 13587.35 1.00
fru-M-800045 986 FruMARCM-M001166_seg001 fru-Gal4 M 7499.90 0.52
Cha-F-100128 4870 ChaMARCM-F000991_seg001 Cha-Gal4 F 2896.72 0.44
Cha-F-200227 5117 ChaMARCM-F001174_seg001 Cha-Gal4 F 8183.03 0.36
Cha-F-800020 7577 ChaMARCM-F000436_seg001 Cha-Gal4 F 5629.48 0.40
VGlut-F-000513 9086 DvGlutMARCM-F003401_seg001 VGlut-Gal4 F 8531.78 0.37
VGlut-F-900007 14857 DvGlutMARCM-F1204_seg1 VGlut-Gal4 F 8331.46 0.53