Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-000517), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
686 VGlut-F-900065 VII 0.68
509 VGlut-F-200536 VII 0.53
852 TH-F-100030 VII 0.51
406 fru-F-000053 VII 0.50
666 TH-F-200011 IX 0.45

Cluster composition

This cluster has 15 neurons. The exemplar of this cluster (VGlut-F-000517) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-000517 8878 DvGlutMARCM-F003459_seg001 VGlut-Gal4 F 60488.20 1.00
TH-M-400006 3138 THMARCM-181M_seg1 TH-Gal4 M 25281.69 0.56
VGlut-F-000631 6937 DvGlutMARCM-F004091_seg001 VGlut-Gal4 F 33746.56 0.40
VGlut-F-100274 8573 DvGlutMARCM-F003139_seg001 VGlut-Gal4 F 39130.44 0.55
VGlut-F-400754 8653 DvGlutMARCM-F003703_seg001 VGlut-Gal4 F 39021.69 0.58
VGlut-F-200526 8714 DvGlutMARCM-F003748_seg001 VGlut-Gal4 F 41364.40 0.65
VGlut-F-300480 9363 DvGlutMARCM-F003196_seg002 VGlut-Gal4 F 40773.66 0.66
Cha-F-600005 10126 ChaMARCM-F000074_seg002 Cha-Gal4 F 22900.64 0.39
VGlut-F-200444 11084 DvGlutMARCM-F002958_seg001 VGlut-Gal4 F 42204.90 0.64
VGlut-F-400461 12885 DvGlutMARCM-F1927_seg1 VGlut-Gal4 F 23043.89 0.54
VGlut-F-000286 14396 DvGlutMARCM-F1076_seg1 VGlut-Gal4 F 27231.43 0.50
VGlut-F-900014 14901 DvGlutMARCM-F1244_seg1 VGlut-Gal4 F 28276.69 0.50
VGlut-F-300225 14903 DvGlutMARCM-F1246_seg1 VGlut-Gal4 F 42182.85 0.67
VGlut-F-800004 15746 DvGlutMARCM-F155_seg1 VGlut-Gal4 F 29484.98 0.54
VGlut-F-400062 15950 DvGlutMARCM-F345_seg1 VGlut-Gal4 F 28250.75 0.49