Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-700031), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
468 VGlut-F-600670 III 0.44
1006 VGlut-F-500043 III 0.32
209 Trh-M-600023 III 0.31
661 Tdc2-F-000027 VII 0.30
72 fru-M-100190 VII 0.30

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (Cha-F-700031) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-700031 8099 ChaMARCM-F000156_seg003 Cha-Gal4 F 4794.87 1.00
Cha-F-200288 4197 ChaMARCM-F001295_seg005 Cha-Gal4 F 1352.36 0.40
Cha-F-000383 4470 ChaMARCM-F001509_seg002 Cha-Gal4 F 1747.30 0.41
Cha-F-000214 5019 ChaMARCM-F001109_seg001 Cha-Gal4 F 2260.81 0.31
Cha-F-700060 8159 ChaMARCM-F000186_seg002 Cha-Gal4 F 3765.92 0.80
fru-F-900000 11440 FruMARCM-F000060_seg001 fru-Gal4 F 2143.91 0.52
VGlut-F-400467 12907 DvGlutMARCM-F1949_seg3 VGlut-Gal4 F 976.58 0.32