Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-500100), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
175 Trh-M-700055 III 0.51
468 VGlut-F-600670 III 0.39
660 Tdc2-F-200049 I 0.35
327 Cha-F-100171 I 0.33
1006 VGlut-F-500043 III 0.22

Cluster composition

This cluster has 6 neurons. The exemplar of this cluster (Cha-F-500100) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-500100 7234 ChaMARCM-F000410_seg003 Cha-Gal4 F 3633.16 1.00
Cha-F-600176 3834 ChaMARCM-F001582_seg001 Cha-Gal4 F 1652.39 0.45
Cha-F-100292 4275 ChaMARCM-F001352_seg001 Cha-Gal4 F 1709.91 0.40
Cha-F-100202 5007 ChaMARCM-F001099_seg001 Cha-Gal4 F 2011.94 0.54
Cha-F-400083 7486 ChaMARCM-F000355_seg003 Cha-Gal4 F 517.50 0.42
VGlut-F-500691 8954 DvGlutMARCM-F003516_seg002 VGlut-Gal4 F 1667.29 0.51