Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-300149), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.60
766 VGlut-F-500387 II 0.54
780 VGlut-F-800076 II 0.44
249 Gad1-F-800081 I 0.42
660 Tdc2-F-200049 I 0.42

Cluster composition

This cluster has 5 neurons. The exemplar of this cluster (Cha-F-300149) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-300149 7112 ChaMARCM-F000586_seg001 Cha-Gal4 F 5706.00 1.00
Cha-F-000213 5018 ChaMARCM-F001108_seg001 Cha-Gal4 F 3915.28 0.68
VGlut-F-700540 6578 DvGlutMARCM-F004340_seg001 VGlut-Gal4 F 4098.35 0.70
VGlut-F-700288 8525 DvGlutMARCM-F003104_seg001 VGlut-Gal4 F 4056.52 0.73
VGlut-F-400480 12996 DvGlutMARCM-F2027_seg2 VGlut-Gal4 F 2063.69 0.53