Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-500822), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
817 VGlut-F-000425 II 0.63
507 VGlut-F-300536 II 0.52
486 VGlut-F-300556 II 0.50
610 Gad1-F-600057 II 0.41
78 fru-M-300243 II 0.38

Cluster composition

This cluster has 10 neurons. The exemplar of this cluster (VGlut-F-500822) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-500822 6610 DvGlutMARCM-F004365_seg002 VGlut-Gal4 F 5045.43 1.00
Cha-F-000342 4356 ChaMARCM-F001416_seg001 Cha-Gal4 F 3382.50 0.67
Cha-F-000357 4413 ChaMARCM-F001462_seg001 Cha-Gal4 F 3652.80 0.70
Cha-F-000198 5238 ChaMARCM-F001085_seg001 Cha-Gal4 F 3048.11 0.54
VGlut-F-600137 6102 DvGlutMARCM-F2165_seg1 VGlut-Gal4 F 3252.33 0.63
Gad1-F-300077 6148 GadMARCM-F000326_seg002 Gad1-Gal4 F 2912.60 0.57
VGlut-F-400815 6736 DvGlutMARCM-F003941_seg003 VGlut-Gal4 F 2574.73 0.53
Gad1-F-200031 10651 GadMARCM-F000146_seg001 Gad1-Gal4 F 3609.94 0.71
VGlut-F-600376 12222 DvGlutMARCM-F002688_seg002 VGlut-Gal4 F 2498.76 0.52
VGlut-F-900004 14854 DvGlutMARCM-F1201_seg1 VGlut-Gal4 F 2888.01 0.57