Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (VGlut-F-800311), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
935 VGlut-F-100111 V 0.63
18 fru-M-300281 V 0.59
712 VGlut-F-900055 V 0.53
899 VGlut-F-100044 V 0.52
133 fru-M-700043 I 0.52

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (VGlut-F-800311) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
VGlut-F-800311 5907 DvGlutMARCM-F004575_seg004 VGlut-Gal4 F 5990.73 1.00
fru-F-700179 4826 FruMARCM-F002190_seg002 fru-Gal4 F 3828.56 0.52
Cha-F-900020 7473 ChaMARCM-F000347_seg004 Cha-Gal4 F 2830.47 0.57
Cha-F-700132 7745 ChaMARCM-F000549_seg001 Cha-Gal4 F 4026.75 0.56
Gad1-F-800030 9166 GadMARCM-F000389_seg003 Gad1-Gal4 F 4164.67 0.66
VGlut-F-700319 9248 DvGlutMARCM-F003308_seg001 VGlut-Gal4 F 3757.53 0.62
VGlut-F-000486 10207 DvGlutMARCM-F002237_seg001 VGlut-Gal4 F 4028.86 0.61
VGlut-F-800100 11100 DvGlutMARCM-F002970_seg001 VGlut-Gal4 F 4049.87 0.66
VGlut-F-400191 14458 DvGlutMARCM-F743-X3_seg3 VGlut-Gal4 F 3309.62 0.46
VGlut-F-400259 14629 DvGlutMARCM-F885_seg2 VGlut-Gal4 F 3861.31 0.63
VGlut-F-200200 14750 DvGlutMARCM-F1102_seg1 VGlut-Gal4 F 3730.08 0.52
VGlut-F-500041 15819 DvGlutMARCM-F225_seg1 VGlut-Gal4 F 3839.15 0.60
VGlut-F-000070 15998 DvGlutMARCM-F386_seg1 VGlut-Gal4 F 2919.93 0.56