Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-400211), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
175 Trh-M-700055 III 0.43
209 Trh-M-600023 III 0.36
468 VGlut-F-600670 III 0.36
704 VGlut-F-800090 I 0.25
21 fru-M-300286 III 0.19

Cluster composition

This cluster has 13 neurons. The exemplar of this cluster (Cha-F-400211) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-400211 5691 ChaMARCM-F000950_seg001 Cha-Gal4 F 8211.63 1.00
fru-M-400106 1342 FruMARCM-M001094_seg003 fru-Gal4 M 5093.27 0.49
fru-M-900021 1627 FruMARCM-M000748_seg001 fru-Gal4 M 4895.09 0.57
Trh-M-000129 2315 TPHMARCM-M001797_seg001 Trh-Gal4 M 3788.51 0.46
Cha-F-100201 5006 ChaMARCM-F001098_seg001 Cha-Gal4 F 3737.25 0.30
Cha-F-700158 5568 ChaMARCM-F000867_seg001 Cha-Gal4 F 4275.27 0.47
Cha-F-200116 7107 ChaMARCM-F000581_seg002 Cha-Gal4 F 4444.06 0.46
Cha-F-500073 8293 ChaMARCM-F000265_seg002 Cha-Gal4 F 4762.03 0.43
Cha-F-200019 10157 ChaMARCM-F000092_seg001 Cha-Gal4 F 3440.62 0.37
VGlut-F-500218 10810 DvGlutMARCM-F1650_seg1 VGlut-Gal4 F 2863.42 0.39
Trh-F-400026 13913 TPHMARCM-189F_seg1 Trh-Gal4 F 4458.35 0.49
VGlut-F-300117 15521 DvGlutMARCM-F668_seg1 VGlut-Gal4 F 4190.09 0.41
VGlut-F-200102 16148 DvGlutMARCM-F532_seg1 VGlut-Gal4 F 1325.08 0.33