Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-000160), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
231 Cha-F-300338 XIV 0.54
659 Tdc2-F-300029 XIV 0.49
416 fru-F-600085 XIV 0.47
204 Trh-M-100025 XIV 0.44
387 Tdc2-F-000040 XIV 0.43

Cluster composition

This cluster has 19 neurons. The exemplar of this cluster (Cha-F-000160) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-000160 5666 ChaMARCM-F000934_seg001 Cha-Gal4 F 20193.10 1.00
Cha-F-000385 3836 ChaMARCM-F001511_seg001 Cha-Gal4 F 14931.61 0.74
Cha-F-000363 4427 ChaMARCM-F001474_seg001 Cha-Gal4 F 14976.97 0.75
Cha-F-100181 4930 ChaMARCM-F001037_seg001 Cha-Gal4 F 16016.60 0.78
Cha-F-700144 5371 ChaMARCM-F000738_seg002 Cha-Gal4 F 11365.29 0.60
Cha-F-000020 5967 ChaMARCM-F000097_seg002 Cha-Gal4 F 15157.50 0.76
Cha-F-600095 7193 ChaMARCM-F000641_seg001 Cha-Gal4 F 14797.69 0.69
Cha-F-300116 7448 ChaMARCM-F000332_seg001 Cha-Gal4 F 14767.22 0.74
Cha-F-100032 7544 ChaMARCM-F000397_seg001 Cha-Gal4 F 15127.78 0.77
Cha-F-100018 8186 ChaMARCM-F000199_seg001 Cha-Gal4 F 15245.74 0.76
Cha-F-400036 8191 ChaMARCM-F000203_seg002 Cha-Gal4 F 15206.47 0.75
Gad1-F-000044 9517 GadMARCM-F000403_seg003 Gad1-Gal4 F 15316.05 0.75
Gad1-F-600060 9642 GadMARCM-F000496_seg001 Gad1-Gal4 F 15479.63 0.76
Gad1-F-300131 9691 GadMARCM-F000540_seg001 Gad1-Gal4 F 14843.88 0.72
Gad1-F-600083 9713 GadMARCM-F000555_seg001 Gad1-Gal4 F 15122.50 0.74
Cha-F-500022 10140 ChaMARCM-F000083_seg001 Cha-Gal4 F 15286.43 0.75
Gad1-F-500036 10524 GadMARCM-F000165_seg001 Gad1-Gal4 F 14835.78 0.75
Gad1-F-300032 10560 GadMARCM-F000085_seg001 Gad1-Gal4 F 4370.32 0.32
Gad1-F-600001 10575 GadMARCM-F000096_seg001 Gad1-Gal4 F 15207.17 0.76