Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-600141), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
509 VGlut-F-200536 VII 0.50
486 VGlut-F-300556 II 0.41
775 VGlut-F-500422 II 0.41
647 Trh-F-000067 II 0.39
944 VGlut-F-400348 II 0.35

Cluster composition

This cluster has 11 neurons. The exemplar of this cluster (Cha-F-600141) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-600141 5621 ChaMARCM-F000904_seg001 Cha-Gal4 F 9863.07 1.00
Cha-F-400250 3921 ChaMARCM-F001579_seg001 Cha-Gal4 F 6395.07 0.63
Cha-F-200176 5574 ChaMARCM-F000872_seg001 Cha-Gal4 F 4801.94 0.40
Cha-F-600134 5599 ChaMARCM-F000888_seg001 Cha-Gal4 F 9044.30 0.91
Cha-F-500161 5640 ChaMARCM-F000917_seg001 Cha-Gal4 F 5716.58 0.54
Cha-F-300173 7207 ChaMARCM-F000650_seg001 Cha-Gal4 F 6896.69 0.64
VGlut-F-500700 8755 DvGlutMARCM-F003578_seg004 VGlut-Gal4 F 4694.67 0.53
Cha-F-500007 10086 ChaMARCM-F000045_seg002 Cha-Gal4 F 4258.66 0.40
Gad1-F-200048 10692 GadMARCM-F000191_seg001 Gad1-Gal4 F 5040.25 0.47
Gad1-F-200058 11233 GadMARCM-F000215_seg001 Gad1-Gal4 F 2827.45 0.31
Gad1-F-900022 11295 GadMARCM-F000268_seg001 Gad1-Gal4 F 6076.79 0.48