Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-200254), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
1028 VGlut-F-000067 XIV 0.44
192 TH-M-300027 XIV 0.37
204 Trh-M-100025 XIV 0.35
273 Cha-F-000338 XII 0.34
42 fru-M-300180 XIV 0.33

Cluster composition

This cluster has 5 neurons. The exemplar of this cluster (Cha-F-200254) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-200254 5170 ChaMARCM-F001210_seg002 Cha-Gal4 F 36969.44 1.00
fru-M-000086 555 FruMARCM-M001728_seg001 fru-Gal4 M 18568.26 0.53
5-HT1B-M-600000 2530 5HT1bMARCM-M000071_seg001 5-HT1B-Gal4 M 10672.85 0.46
Cha-F-200124 5266 ChaMARCM-F000664_seg001 Cha-Gal4 F 23190.84 0.61
Cha-F-000071 7547 ChaMARCM-F000400_seg001 Cha-Gal4 F 17238.80 0.48