Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-200253), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
988 VGlut-F-200005 X 0.37
652 Tdc2-F-200010 VIII 0.26
686 VGlut-F-900065 VII 0.18
852 TH-F-100030 VII 0.13
454 VGlut-F-500770 VIII 0.12

Cluster composition

This cluster has 3 neurons. The exemplar of this cluster (Cha-F-200253) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-200253 5169 ChaMARCM-F001210_seg001 Cha-Gal4 F 24486.84 1.00
Cha-F-000270 5205 ChaMARCM-F001238_seg001 Cha-Gal4 F 8364.84 0.50
Cha-F-300260 5674 ChaMARCM-F000937_seg003 Cha-Gal4 F 12248.22 0.51