Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-000249), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.59
262 Cha-F-200316 II 0.54
660 Tdc2-F-200049 I 0.45
940 VGlut-F-400342 II 0.44
647 Trh-F-000067 II 0.40

Cluster composition

This cluster has 12 neurons. The exemplar of this cluster (Cha-F-000249) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-000249 5142 ChaMARCM-F001191_seg001 Cha-Gal4 F 10683.10 1.00
Gad1-F-000069 4065 GadMARCM-F000660_seg001 Gad1-Gal4 F 7566.52 0.71
Cha-F-100101 5510 ChaMARCM-F000826_seg001 Cha-Gal4 F 6157.82 0.57
VGlut-F-700498 7035 DvGlutMARCM-F004169_seg003 VGlut-Gal4 F 5888.99 0.54
Cha-F-500132 7184 ChaMARCM-F000635_seg002 Cha-Gal4 F 6090.57 0.56
VGlut-F-200508 8825 DvGlutMARCM-F003629_seg001 VGlut-Gal4 F 6814.24 0.58
VGlut-F-700334 9068 DvGlutMARCM-F003386_seg001 VGlut-Gal4 F 3852.29 0.43
Gad1-F-400065 9472 GadMARCM-F000371_seg002 Gad1-Gal4 F 4663.81 0.49
Cha-F-100017 10182 ChaMARCM-F000111_seg001 Cha-Gal4 F 6333.00 0.57
Gad1-F-100012 10673 GadMARCM-F000180_seg001 Gad1-Gal4 F 5308.83 0.45
VGlut-F-700184 10908 DvGlutMARCM-F002809_seg002 VGlut-Gal4 F 4871.02 0.46
VGlut-F-400113 15499 DvGlutMARCM-F655-X4_seg2 VGlut-Gal4 F 5365.43 0.55