Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-000365), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.63
249 Gad1-F-800081 I 0.54
766 VGlut-F-500387 II 0.48
620 Gad1-F-800061 I 0.41
676 Gad1-F-700015 I 0.40

Cluster composition

This cluster has 10 neurons. The exemplar of this cluster (Cha-F-000365) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-000365 4429 ChaMARCM-F001476_seg001 Cha-Gal4 F 5193.49 1.00
Cha-F-600175 3923 ChaMARCM-F001581_seg001 Cha-Gal4 F 3245.99 0.64
Cha-F-100224 5144 ChaMARCM-F001193_seg001 Cha-Gal4 F 3674.78 0.71
Cha-F-500160 5632 ChaMARCM-F000911_seg001 Cha-Gal4 F 3157.92 0.59
VGlut-F-500873 5860 DvGlutMARCM-F004544_seg001 VGlut-Gal4 F 2398.68 0.48
VGlut-F-600762 6961 DvGlutMARCM-F004111_seg002 VGlut-Gal4 F 2601.65 0.51
VGlut-F-000586 7916 DvGlutMARCM-F003760_seg001 VGlut-Gal4 F 3071.23 0.58
VGlut-F-800145 9250 DvGlutMARCM-F003310_seg002 VGlut-Gal4 F 2453.02 0.45
VGlut-F-400420 10243 DvGlutMARCM-F1801_seg2 VGlut-Gal4 F 2058.72 0.50
VGlut-F-000227 14700 DvGlutMARCM-F957_seg1 VGlut-Gal4 F 2841.31 0.56