Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-100336), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
486 VGlut-F-300556 II 0.74
660 Tdc2-F-200049 I 0.60
766 VGlut-F-500387 II 0.57
67 fru-M-700128 II 0.48
780 VGlut-F-800076 II 0.47

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (Cha-F-100336) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-100336 4394 ChaMARCM-F001444_seg001 Cha-Gal4 F 50613.74 1.00
Cha-F-400241 3869 ChaMARCM-F001536_seg001 Cha-Gal4 F 14650.03 0.41
Cha-F-000285 4159 ChaMARCM-F001272_seg001 Cha-Gal4 F 29637.79 0.54
Cha-F-000116 5324 ChaMARCM-F000701_seg001 Cha-Gal4 F 36109.67 0.58
Cha-F-000013 10153 ChaMARCM-F000088_seg001 Cha-Gal4 F 28203.01 0.50
VGlut-F-400659 10222 DvGlutMARCM-F003042_seg001 VGlut-Gal4 F 24252.27 0.45
Gad1-F-900023 11296 GadMARCM-F000269_seg001 Gad1-Gal4 F 30978.51 0.66