Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-000338), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
863 TH-F-000022 XII 0.34
994 VGlut-F-200045 XIX 0.24
192 TH-M-300027 XIV 0.21
859 TH-F-200089 XIV 0.18
499 Cha-F-200093 XIX 0.17

Cluster composition

This cluster has 3 neurons. The exemplar of this cluster (Cha-F-000338) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-000338 4350 ChaMARCM-F001407_seg002 Cha-Gal4 F 93710.58 1.00
Cha-F-100158 4903 ChaMARCM-F001017_seg001 Cha-Gal4 F 64624.29 0.68
VGlut-F-000176 16207 DvGlutMARCM-F587-X2_seg1 VGlut-Gal4 F 62874.52 0.67