Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-100311), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
660 Tdc2-F-200049 I 0.51
930 VGlut-F-300185 I 0.44
175 Trh-M-700055 III 0.32
468 VGlut-F-600670 III 0.27
327 Cha-F-100171 I 0.24

Cluster composition

This cluster has 6 neurons. The exemplar of this cluster (Cha-F-100311) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-100311 4348 ChaMARCM-F001406_seg001 Cha-Gal4 F 4259.57 1.00
Cha-F-300286 5080 ChaMARCM-F001146_seg001 Cha-Gal4 F 2677.61 0.63
VGlut-F-100357 6926 DvGlutMARCM-F004081_seg001 VGlut-Gal4 F 2676.54 0.46
Cha-F-200077 7597 ChaMARCM-F000449_seg001 Cha-Gal4 F 2758.43 0.70
Trh-F-900003 13922 TPHMARCM-213F_seg1 Trh-Gal4 F 1535.74 0.35
VGlut-F-400397 15262 DvGlutMARCM-F1582_seg1 VGlut-Gal4 F 2683.52 0.60