Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-200330), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
660 Tdc2-F-200049 I 0.65
209 Trh-M-600023 III 0.52
468 VGlut-F-600670 III 0.52
733 fru-F-800000 III 0.50
759 VGlut-F-600257 III 0.46

Cluster composition

This cluster has 7 neurons. The exemplar of this cluster (Cha-F-200330) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-200330 4297 ChaMARCM-F001366_seg002 Cha-Gal4 F 11844.80 1.00
Cha-F-500196 3864 ChaMARCM-F001532_seg001 Cha-Gal4 F 8106.77 0.70
Cha-F-200327 4294 ChaMARCM-F001365_seg001 Cha-Gal4 F 7812.47 0.58
Cha-F-200250 5160 ChaMARCM-F001204_seg001 Cha-Gal4 F 7973.41 0.44
Cha-F-800026 5346 ChaMARCM-F000718_seg001 Cha-Gal4 F 6283.63 0.31
fru-F-700137 6299 FruMARCM-F001397_seg001 fru-Gal4 F 6652.48 0.53
Gad1-F-400033 11362 GadMARCM-F000320_seg001 Gad1-Gal4 F 6957.20 0.63