Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-200308), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
209 Trh-M-600023 III 0.36
468 VGlut-F-600670 III 0.32
661 Tdc2-F-000027 VII 0.27
64 fru-M-300237 III 0.27
173 Trh-M-000051 III 0.25

Cluster composition

This cluster has 8 neurons. The exemplar of this cluster (Cha-F-200308) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-200308 4251 ChaMARCM-F001334_seg001 Cha-Gal4 F 7368.83 1.00
Cha-F-100352 3852 ChaMARCM-F001524_seg001 Cha-Gal4 F 3648.73 0.31
Cha-F-100124 4856 ChaMARCM-F000978_seg001 Cha-Gal4 F 4363.54 0.50
Cha-F-500174 5113 ChaMARCM-F001168_seg001 Cha-Gal4 F 1983.64 0.39
Cha-F-000132 5358 ChaMARCM-F000727_seg001 Cha-Gal4 F 3017.40 0.46
Cha-F-100038 7243 ChaMARCM-F000416_seg001 Cha-Gal4 F 3122.89 0.30
Cha-F-900025 7478 ChaMARCM-F000351_seg001 Cha-Gal4 F 2350.83 0.36
Trh-F-600048 13295 TPHMARCM-779F_seg8 Trh-Gal4 F 4025.53 0.60