Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-200304), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
687 VGlut-F-500173 IX 0.49
341 Cha-F-000236 IX 0.42
749 5-HT1B-F-200000 IX 0.40
176 Trh-M-300108 IX 0.36
199 TH-M-000044 XIX 0.31

Cluster composition

This cluster has 11 neurons. The exemplar of this cluster (Cha-F-200304) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-200304 4247 ChaMARCM-F001331_seg002 Cha-Gal4 F 31810.12 1.00
Cha-F-000286 4160 ChaMARCM-F001272_seg002 Cha-Gal4 F 19842.12 0.60
fru-F-700172 4811 FruMARCM-F002152_seg001 fru-Gal4 F 20420.34 0.52
Cha-F-000207 5012 ChaMARCM-F001103_seg001 Cha-Gal4 F 18065.30 0.57
Cha-F-600135 5605 ChaMARCM-F000891_seg001 Cha-Gal4 F 21404.92 0.60
fru-F-600059 6174 FruMARCM-F001110_seg001 fru-Gal4 F 20918.82 0.63
fru-F-300070 6207 FruMARCM-F001131_seg003 fru-Gal4 F 11738.39 0.40
Cha-F-400107 7609 ChaMARCM-F000454_seg001 Cha-Gal4 F 19482.96 0.49
fru-F-400069 9885 FruMARCM-F000479_seg001 fru-Gal4 F 15715.40 0.45
fru-F-500087 10019 FruMARCM-F000605_seg002 fru-Gal4 F 17207.54 0.53
Gad1-F-600035 11357 GadMARCM-F000315_seg002 Gad1-Gal4 F 13701.13 0.44