Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Cha-F-000273), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
468 VGlut-F-600670 III 0.43
983 VGlut-F-200145 V 0.41
208 Trh-M-500030 III 0.41
209 Trh-M-600023 III 0.40
661 Tdc2-F-000027 VII 0.39

Cluster composition

This cluster has 10 neurons. The exemplar of this cluster (Cha-F-000273) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Cha-F-000273 4146 ChaMARCM-F001264_seg001 Cha-Gal4 F 9088.61 1.00
fru-M-100184 831 FruMARCM-M002034_seg001 fru-Gal4 M 5496.57 0.57
Trh-M-400014 3505 TPHMARCM-369M_seg1 Trh-Gal4 M 4133.43 0.50
Cha-F-700188 3831 ChaMARCM-F001544_seg001 Cha-Gal4 F 4195.20 0.51
Cha-F-500193 3861 ChaMARCM-F001530_seg001 Cha-Gal4 F 4582.39 0.48
Cha-F-100276 4235 ChaMARCM-F001322_seg001 Cha-Gal4 F 4615.97 0.47
Cha-F-100091 5386 ChaMARCM-F000749_seg001 Cha-Gal4 F 5060.19 0.57
fru-F-500060 9980 FruMARCM-F000569_seg002 fru-Gal4 F 5088.59 0.49
Gad1-F-900012 10623 GadMARCM-F000126_seg001 Gad1-Gal4 F 5697.12 0.42
VGlut-F-300099 15444 DvGlutMARCM-F602_seg1 VGlut-Gal4 F 5112.35 0.47