Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-M-500074), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
148 Trh-M-400144 X 0.62
200 TH-M-000060 X 0.44
865 TH-F-000025 X 0.39
532 Cha-F-300093 X 0.34
177 Trh-M-300109 VIII 0.30

Cluster composition

This cluster has 21 neurons. The exemplar of this cluster (Trh-M-500074) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-M-500074 3014 TPHMARCM-966M_seg1 Trh-Gal4 M 11207.00 1.00
Trh-M-300088 1990 TPHMARCM-0926M_seg001 Trh-Gal4 M 7960.02 0.73
Trh-M-900054 2175 TPHMARCM-M001664_seg002 Trh-Gal4 M 8410.84 0.73
Trh-M-400145 2268 TPHMARCM-M001756_seg001 Trh-Gal4 M 8565.82 0.77
Trh-M-500086 2762 TPHMARCM-1068M_seg1 Trh-Gal4 M 8499.38 0.77
Trh-M-500083 2823 TPHMARCM-1052M_seg1 Trh-Gal4 M 8031.62 0.74
Trh-M-400066 2834 TPHMARCM-1061M_seg1 Trh-Gal4 M 7486.19 0.65
Trh-M-300117 2910 TPHMARCM-1157M_seg1 Trh-Gal4 M 7768.26 0.71
Trh-M-300083 2968 TPHMARCM-909M_seg1 Trh-Gal4 M 8270.29 0.75
Trh-M-500073 3011 TPHMARCM-963M_seg1 Trh-Gal4 M 7144.71 0.61
Trh-M-100038 3542 TPHMARCM-452M_seg1 Trh-Gal4 M 7688.97 0.70
Trh-M-400022 3573 TPHMARCM-503M_seg1 Trh-Gal4 M 8383.58 0.75
Trh-M-300069 3685 TPHMARCM-798M_seg2 Trh-Gal4 M 7183.51 0.61
VGlut-F-400809 6729 DvGlutMARCM-F003938_seg001 VGlut-Gal4 F 7800.78 0.71
VGlut-F-500731 7422 DvGlutMARCM-F003877_seg001 VGlut-Gal4 F 5395.92 0.44
Tdc2-F-500003 10299 dTdc2MARCM-F000162_seg002 Tdc2-Gal4 F 8071.99 0.59
VGlut-F-600457 10993 DvGlutMARCM-F002883_seg001 VGlut-Gal4 F 8687.50 0.77
VGlut-F-500492 11032 DvGlutMARCM-F002913_seg001 VGlut-Gal4 F 8156.66 0.75
Trh-F-500091 13280 TPHMARCM-767F_seg1 Trh-Gal4 F 8299.69 0.72
Trh-F-400027 13941 TPHMARCM-233F-repeated0811-04_seg1 Trh-Gal4 F 8034.43 0.74
Trh-F-300092 14188 TPHMARCM-630F_seg1 Trh-Gal4 F 8639.09 0.78