Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-M-000046), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
876 Trh-F-100023 X 0.70
200 TH-M-000060 X 0.51
939 VGlut-F-400341 X 0.50
321 Cha-F-600151 X 0.41
995 VGlut-F-400009 X 0.40

Cluster composition

This cluster has 15 neurons. The exemplar of this cluster (Trh-M-000046) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-M-000046 2691 TPHMARCM-M001458_seg001 Trh-Gal4 M 67014.23 1.00
Trh-M-000124 2310 TPHMARCM-M001792_seg001 Trh-Gal4 M 50653.72 0.75
Trh-M-900027 2814 TPHMARCM-1043M_seg1 Trh-Gal4 M 50248.34 0.75
Trh-M-500011 3457 TPHMARCM-228M_seg1 Trh-Gal4 M 49845.49 0.73
Gad1-F-000083 4083 GadMARCM-F000672_seg001 Gad1-Gal4 F 33605.11 0.61
fru-F-000103 4653 FruMARCM-F001817_seg001 fru-Gal4 F 39594.00 0.60
Cha-F-600102 5418 ChaMARCM-F000770_seg001 Cha-Gal4 F 42294.50 0.65
Cha-F-600113 5434 ChaMARCM-F000779_seg002 Cha-Gal4 F 39308.81 0.58
Cha-F-700088 7529 ChaMARCM-F000378_seg001 Cha-Gal4 F 21063.72 0.51
Trh-F-000064 10044 TPHMARCM-F001826_seg001 Trh-Gal4 F 51573.20 0.76
Trh-F-000077 10057 TPHMARCM-F001835_seg001 Trh-Gal4 F 51964.50 0.77
Trh-F-000046 12567 TPHMARCM-F001360_seg001 Trh-Gal4 F 51535.04 0.77
Trh-F-000036 14281 TPHMARCM-825F_seg3 Trh-Gal4 F 49727.47 0.74
VGlut-F-100150 15061 DvGlutMARCM-F1397_seg1 VGlut-Gal4 F 40771.16 0.51
VGlut-F-000140 16158 DvGlutMARCM-F540_seg1 VGlut-Gal4 F 41145.17 0.68