Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (5-HT1B-M-400020), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
851 TH-F-100029 XIV 0.75
964 VGlut-F-200325 XIV 0.69
1028 VGlut-F-000067 XIV 0.56
149 Trh-M-000082 XIV 0.51
449 VGlut-F-600742 XIV 0.46

Cluster composition

This cluster has 21 neurons. The exemplar of this cluster (5-HT1B-M-400020) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
5-HT1B-M-400020 2537 5HT1bMARCM-M000076_seg001 5-HT1B-Gal4 M 7254.94 1.00
5-HT1B-M-500000 2487 5HT1bMARCM-M000033_seg001 5-HT1B-Gal4 M 5644.25 0.77
5-HT1B-M-400001 2497 5HT1bMARCM-M000043_seg001 5-HT1B-Gal4 M 5653.43 0.77
5-HT1B-M-300001 2511 5HT1bMARCM-M000054_seg001 5-HT1B-Gal4 M 5852.14 0.76
5-HT1B-M-400013 2521 5HT1bMARCM-M000062_seg001 5-HT1B-Gal4 M 5790.92 0.78
5-HT1B-M-500007 2525 5HT1bMARCM-M000066_seg001 5-HT1B-Gal4 M 5655.72 0.78
5-HT1B-M-400018 2528 5HT1bMARCM-M000069_seg001 5-HT1B-Gal4 M 5345.65 0.74
Gad1-F-000086 3937 GadMARCM-F000682_seg001 Gad1-Gal4 F 5580.30 0.75
Gad1-F-100064 3942 GadMARCM-F000572_seg001 Gad1-Gal4 F 5490.19 0.73
Gad1-F-000080 4080 GadMARCM-F000670_seg001 Gad1-Gal4 F 5688.27 0.76
Gad1-F-000089 4101 GadMARCM-F000690_seg001 Gad1-Gal4 F 5652.69 0.76
VGlut-F-500874 5884 DvGlutMARCM-F004566_seg001 VGlut-Gal4 F 5509.46 0.72
VGlut-F-200494 8742 DvGlutMARCM-F003568_seg002 VGlut-Gal4 F 4904.89 0.64
VGlut-F-200478 8970 DvGlutMARCM-F003530_seg001 VGlut-Gal4 F 5414.40 0.74
Gad1-F-000050 9566 GadMARCM-F000440_seg001 Gad1-Gal4 F 5621.62 0.76
Gad1-F-700047 9707 GadMARCM-F000549_seg002 Gad1-Gal4 F 5659.11 0.76
Gad1-F-400007 10539 GadMARCM-F000070_seg001 Gad1-Gal4 F 5084.62 0.68
5-HT1B-F-500022 11203 5HT1bMARCM-F000032_seg001 5-HT1B-Gal4 F 5624.38 0.77
5-HT1B-F-500002 11607 5HT1bMARCM-F000004_seg001 5-HT1B-Gal4 F 5781.90 0.77
5-HT1B-F-400002 11627 5HT1bMARCM-F000020_seg001 5-HT1B-Gal4 F 5806.29 0.79
VGlut-F-000065 15991 DvGlutMARCM-F380_seg1 VGlut-Gal4 F 4780.31 0.53