Click for 3D rendering of cluster

About

Scores are NBLAST (version 2) similarity scores between each neuron and the exemplar (Trh-M-000122), normalised to the self-score of the exemplar. The higher the better! Scores > 0 indicate a match of some sort. Excellent matches will have scores > 0.5.

Do you recognise any of the neurons in this cluster? Email us!

Credits

Raw data provided by flycircuit.tw as described in Three-Dimensional Reconstruction of Brain-wide Wiring Networks in Drosophila at Single-Cell Resolution by Ann-Shyn Chiang et al.

Image processing carried out with unu, CMTK, and Fiji.

Further processing carried out in R with nat. Clustering used package apcluster. 3D visualisation written from rgl by writeWebGL.

Similar clusters

The most similar clusters to this one are:

Cluster Exemplar Supercluster Exemplar normalised score
362 Cha-F-400200 IX 0.55
206 Trh-M-000018 XIX 0.52
698 VGlut-F-600430 IX 0.48
176 Trh-M-300108 IX 0.45
283 Cha-F-100343 IX 0.43

Cluster composition

This cluster has 8 neurons. The exemplar of this cluster (Trh-M-000122) is drawn in black.

Neuron idid Gene name Driver Sex Raw score Normalised score
Trh-M-000122 2308 TPHMARCM-M001790_seg001 Trh-Gal4 M 14407.38 1.00
Trh-M-000157 937 TPHMARCM-M001842_seg002 Trh-Gal4 M 7804.40 0.61
Trh-M-000149 1741 TPHMARCM-M001818_seg001 Trh-Gal4 M 10164.21 0.63
fru-M-300064 1922 FruMARCM-M000517_seg001 fru-Gal4 M 10578.52 0.66
Trh-M-000056 2064 TPHMARCM-M001568_seg002 Trh-Gal4 M 9482.28 0.66
Trh-F-500121 8396 TPHMARCM-1240F_seg1 Trh-Gal4 F 9960.50 0.55
Gad1-F-400108 9719 GadMARCM-F000561_seg002 Gad1-Gal4 F 8802.34 0.61
Gad1-F-700021 10643 GadMARCM-F000140_seg001 Gad1-Gal4 F 9231.70 0.63